sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2ZJR-X2262-X2259
X
>3R8S-A2468-A2465
X
>1VQ5-02351-02348
X
>3F1F-A2459-A2456
X
>3F1H-A2459-A2456
X
>3U5D-12596-12593
X
>3U5H-52597-52594
X
</seq>
<hsp>
0 1:0.461885947594
0 2:0.999998373766
0 3:0.893725537434
0 4:0.887887375134
0 5:0.702933604031
0 6:0.664588503788
1 2:0.667096258621
1 3:0.632644408125
1 4:0.631329425527
1 5:0.422394281169
1 6:0.4349913496
2 3:0.409403447283
2 4:0.404258780415
2 5:0.376664047329
2 6:0.503192204689
3 4:0.0338681387537
3 5:0.392631362837
3 6:0.416695444191
4 5:0.382192784528
4 6:0.397545782635
5 6:0.261121466815
</hsp>