sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1YIJ-02557-02599
X
>1VQ4-02557-02599
X
>3G6E-02557-02599
X
>1NJI-A2557-A2599
X
>1VQ6-02557-02599
X
>1YI2-02557-02599
X
>1JJ2-02557-02599
X
>1S72-02557-02599
X
>2OTJ-02557-02599
X
>3CC4-02557-02599
X
>3CPW-02557-02599
X
>1FFK-02509-02551
X
</seq>
<hsp>
0 1:0.412413115072
0 2:0.362219314897
0 3:0.431749994532
0 4:0.60950264303
0 5:0.23169966206
0 6:0.652259211513
0 7:0.631215558657
0 8:0.669133548715
0 9:0.604427299485
0 10:0.463781429397
0 11:0.559736610936
1 2:0.468311980512
1 3:0.292075046563
1 4:0.75067683455
1 5:0.279725860156
1 6:0.494029712003
1 7:0.500139937841
1 8:0.576819400888
1 9:0.424174536141
1 10:0.498672848
1 11:0.464034696158
2 3:0.543324762533
2 4:0.496665596941
2 5:0.419573340123
2 6:0.719326079805
2 7:0.723579470105
2 8:0.498994660495
2 9:0.365534424264
2 10:0.432967526123
2 11:0.497727597372
3 4:0.801699146709
3 5:0.355897170894
3 6:0.347957644376
3 7:0.363397961219
3 8:0.737932236847
3 9:0.586792944335
3 10:0.591314806373
3 11:0.419350763379
4 5:0.659236371574
4 6:0.983515562228
4 7:1.0
4 8:0.806185286205
4 9:0.634720030397
4 10:0.383331748411
4 11:0.570927364359
5 6:0.562247906649
5 7:0.515237733715
5 8:0.606817918838
5 9:0.527343189973
5 10:0.419747086957
5 11:0.48489072321
6 7:0.159908421756
6 8:0.953365626226
6 9:0.751699252147
6 10:0.831530296972
6 11:0.479291712041
7 8:0.917191926536
7 9:0.760542673317
7 10:0.815909916365
7 11:0.519602520729
8 9:0.356626183455
8 10:0.558304876857
8 11:0.78519666796
9 10:0.446210054045
9 11:0.516987934076
10 11:0.500475211232
</hsp>