sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHD-A906-A1320
X
>3OHC-A906-A1320
X
>3CCQ-0118-0129
X
>3CME-0118-0129
X
>3CCL-0118-0129
X
>3CCV-0118-0129
X
>2QA4-0118-0129
X
>3CCS-0118-0129
X
>3CCU-0118-0129
X
>3I56-0118-0129
X
>1YJ9-0118-0129
X
</seq>
<hsp>
0 1:0.0147800233095
0 2:0.999990295333
0 3:0.975408723235
0 4:0.811903174244
0 5:0.803839040137
0 6:0.951116566009
0 7:0.826939607966
0 8:0.730017423728
0 9:0.815737663701
0 10:0.800709612119
1 2:0.996579104761
1 3:0.97359746093
1 4:0.808814769453
1 5:0.799896787755
1 6:0.947819606134
1 7:0.822253570962
1 8:0.725119520136
1 9:0.811598870351
1 10:0.795060557486
2 3:0.398841325314
2 4:0.257731406893
2 5:0.251119590797
2 6:0.412264745938
2 7:0.308567537543
2 8:0.365715860383
2 9:0.45912383037
2 10:0.459557923472
3 4:0.368688102086
3 5:0.374701595461
3 6:0.35885667436
3 7:0.425324513659
3 8:0.486841717946
3 9:0.48408747063
3 10:0.615486065989
4 5:0.0941568690512
4 6:0.41795106902
4 7:0.213778593173
4 8:0.242891101073
4 9:0.391390930794
4 10:0.420400166732
5 6:0.353929364842
5 7:0.138771459218
5 8:0.176986765856
5 9:0.314519476579
5 10:0.338840854827
6 7:0.295838575394
6 8:0.355220773467
6 9:0.204671078526
6 10:0.359699971594
7 8:0.113294958516
7 9:0.226580392657
7 10:0.244298079395
8 9:0.238236145735
8 10:0.208412246052
9 10:0.2019728394
</hsp>