sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OI0-A49-A342
X
>3OHY-A49-A342
X
>2VQF-A49-A342
X
>3KNK-A465-A467
X
>2UUB-A49-A342
X
>2VQE-A49-A342
X
>2UXC-A49-A342
X
>2J02-A49-A342
X
>2J00-A49-A342
X
</seq>
<hsp>
0 1:0.0248637257197
0 2:0.502984275227
0 3:0.780668802011
0 4:0.549299098144
0 5:0.5054406135
0 6:0.449528989597
0 7:0.520111983251
0 8:0.504389249821
1 2:0.498211270343
1 3:0.793266044358
1 4:0.538094250047
1 5:0.506128939437
1 6:0.444704044312
1 7:0.515494233108
1 8:0.499407131259
2 3:0.860211256982
2 4:0.223019250084
2 5:0.259153765102
2 6:0.232113233022
2 7:0.265416300888
2 8:0.250565276935
3 4:1.0
3 5:0.67253555219
3 6:0.76187244559
3 7:0.780318372474
3 8:0.769617669381
4 5:0.374130514006
4 6:0.265834403721
4 7:0.285649669577
4 8:0.280023040865
5 6:0.156648289176
5 7:0.174777682665
5 8:0.169217078375
6 7:0.164139510834
6 8:0.14747040017
7 8:0.0442249299281
</hsp>