sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1G-A485-A486
X
>3F1E-A485-A486
X
>3KNK-A1013-A1014
X
>3F1F-A1026-A1027
X
>3U5D-11142-11143
X
>3F1H-A1026-A1027
X
>3KNI-A1014-A1015
X
>1XMQ-A485-A486
X
</seq>
<hsp>
0 1:0.0330192555562
0 2:0.687226123814
0 3:0.710470967929
0 4:0.352005004454
0 5:0.706261454129
0 6:0.999992736458
0 7:0.714938215687
1 2:0.696414116169
1 3:0.707471276777
1 4:0.353835344485
1 5:0.703362117385
1 6:0.995166619565
1 7:0.711496291887
2 3:0.65371807239
2 4:0.520386459073
2 5:0.643034532927
2 6:0.878123506247
2 7:0.768058365022
3 4:0.411290010101
3 5:0.0311305882071
3 6:0.573401389387
3 7:0.587850665604
4 5:0.401980185482
4 6:0.741981452858
4 7:0.531076455571
5 6:0.570974124684
5 7:0.582898426429
6 7:0.381125743435
</hsp>