sequences=10
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3D0X-A7-A75
X
>3DIO-X10-X78
X
>3DIX-A10-A78
X
>3DIL-A10-A78
X
>3DIR-A10-A78
X
>3DJ0-A10-A78
X
>3DIG-X10-X78
X
>3DJ2-A10-A78
X
>3DIQ-A10-A78
X
>3D0U-A7-A75
X
</seq>
<hsp>
0 1:0.956522066373
0 2:0.919591676779
0 3:0.999999991984
0 4:0.964118184957
0 5:0.956031031086
0 6:0.95567458715
0 7:0.958901385423
0 8:0.926439494875
0 9:0.900839471719
1 2:0.110198995417
1 3:0.0966570044513
1 4:0.208854867993
1 5:0.153197241421
1 6:0.120416088986
1 7:0.107522485364
1 8:0.123446674687
1 9:0.135595705407
2 3:0.104494969022
2 4:0.185680880341
2 5:0.100681884081
2 6:0.115653106126
2 7:0.124264293856
2 8:0.116733429972
2 9:0.0857746044142
3 4:0.195995888052
3 5:0.0942203816819
3 6:0.0887378691206
3 7:0.0985924917518
3 8:0.103017520112
3 9:0.127264732384
4 5:0.165359322882
4 6:0.131273122421
4 7:0.123775415215
4 8:0.156617023285
4 9:0.19927401534
5 6:0.0757691982733
5 7:0.106881437289
5 8:0.0856958172534
5 9:0.108163843556
6 7:0.0400850707222
6 8:0.0413775848496
6 9:0.117995598834
7 8:0.0648212126132
7 9:0.138992410918
8 9:0.100292803559
</hsp>