sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8S-A2025-A2565
X
>3OHZ-A1948-A2402
X
>3OI1-A1948-A2402
X
>3R8T-A2024-A2564
X
>3OH5-A1948-A2402
X
>3OHJ-A1948-A2402
X
>3OHK-A1948-A2402
X
>3F1F-A2026-A2556
X
>3OH7-A1948-A2402
X
>3F1H-A2026-A2556
X
>2J03-A1948-A2449
X
>2J01-A1948-A2449
X
</seq>
<hsp>
0 1:0.797331815463
0 2:0.786241411165
0 3:0.234814863001
0 4:0.790546758245
0 5:0.742369290005
0 6:0.679794150726
0 7:0.905047614982
0 8:0.770830133934
0 9:0.929223707657
0 10:0.990802494687
0 11:0.999993849747
1 2:0.0799196486981
1 3:0.62243701897
1 4:0.166532223545
1 5:0.233735158694
1 6:0.264125377258
1 7:0.373154946586
1 8:0.167564320148
1 9:0.388153516216
1 10:0.503023665676
1 11:0.506465256255
2 3:0.606779257058
2 4:0.129331800611
2 5:0.193991743696
2 6:0.217715202235
2 7:0.355853927284
2 8:0.118140150969
2 9:0.365515479037
2 10:0.470033300323
2 11:0.472333892758
3 4:0.624105893511
3 5:0.588157679755
3 6:0.525239921764
3 7:0.741710573365
3 8:0.603284466532
3 9:0.765024459987
3 10:0.801993340723
3 11:0.810757771631
4 5:0.0999731753319
4 6:0.159041817916
4 7:0.314726287522
4 8:0.0455648130656
4 9:0.317680064911
4 10:0.446471301963
4 11:0.447087064609
5 6:0.079921058543
5 7:0.313136753838
5 8:0.101245502311
5 9:0.316743147645
5 10:0.452216434333
5 11:0.453306619063
6 7:0.345778244685
6 8:0.143584545733
6 9:0.352267455748
6 10:0.469784792267
6 11:0.471872034626
7 8:0.308895280534
7 9:0.0478281999461
7 10:0.276387877966
7 11:0.281269458545
8 9:0.313396255544
8 10:0.440918821775
8 11:0.442237384815
9 10:0.253165041131
9 11:0.255969914481
10 11:0.0177333070528
</hsp>