sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8S-A2818-A2815
X
>3R8T-A2817-A2814
X
>3OI1-A1866-A1870
X
>3OHZ-A1866-A1870
X
>2QEX-01173-01110
X
>3CD6-01173-01110
X
>3CCR-01173-01110
X
>3CMA-0925-0990
X
>3CME-01173-01110
X
>1YJN-01173-01110
X
>1YJW-01173-01110
X
>3CC7-01173-01110
X
>1VQL-01173-01110
X
</seq>
<hsp>
0 1:0.0546402810042
0 2:0.742631795131
0 3:0.740636141073
0 4:0.995114711027
0 5:0.971809956757
0 6:0.968612192965
0 7:0.966019108945
0 8:0.963623379855
0 9:0.999999610332
0 10:0.991878806082
0 11:0.975041151638
0 12:0.989434386306
1 2:0.709034847291
1 3:0.70699191508
1 4:0.950740140229
1 5:0.927995056087
1 6:0.924320830726
1 7:0.922085107744
1 8:0.919472186083
1 9:0.956094893342
1 10:0.947766897189
1 11:0.930962302046
1 12:0.94546972105
2 3:0.0076676562723
2 4:0.532154341455
2 5:0.528753426799
2 6:0.532703086494
2 7:0.515553425364
2 8:0.519048597245
2 9:0.541620285099
2 10:0.543174373515
2 11:0.527602960236
2 12:0.533555828599
3 4:0.532396447389
3 5:0.529147168974
3 6:0.532918442133
3 7:0.515781382964
3 8:0.519174424639
3 9:0.542100317941
3 10:0.543491797039
3 11:0.527851013892
3 12:0.533879820633
4 5:0.060228966556
4 6:0.0583940304587
4 7:0.053255055859
4 8:0.0368694342772
4 9:0.0476037151026
4 10:0.0492589747159
4 11:0.0365657197016
4 12:0.0331201710888
5 6:0.0319899308013
5 7:0.0538891712639
5 8:0.0467535806349
5 9:0.0376932958633
5 10:0.0435425772247
5 11:0.0307207344217
5 12:0.0446520577692
6 7:0.0433826333134
6 8:0.0398671280772
6 9:0.0531184759198
6 10:0.0452193207067
6 11:0.0380958430891
6 12:0.0528460606928
7 8:0.0358187701176
7 9:0.0550931665276
7 10:0.0396869094536
7 11:0.0397913981827
7 12:0.0440436440877
8 9:0.0550361920408
8 10:0.0485357271025
8 11:0.0243512598706
8 12:0.0376631819487
9 10:0.0252519613394
9 11:0.0332935218418
9 12:0.02524700459
10 11:0.0325615388654
10 12:0.026041426485
11 12:0.0212762886304
</hsp>