sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J03-A2635-A2634
X
>3F1E-A420-A419
X
>1I9X-B4-B3
X
>3OHY-A420-A419
X
>1N32-A420-A419
X
>3OHC-A420-A419
X
>2VQE-A420-A419
X
>2UXC-A420-A419
X
>2UUA-A420-A419
X
>3OGE-A420-A419
X
>3OGY-A420-A419
X
>2J00-A420-A419
X
</seq>
<hsp>
0 1:0.15618573943
0 2:1.0
0 3:0.150088510986
0 4:0.144765859042
0 5:0.139748677699
0 6:0.13494616927
0 7:0.108127172909
0 8:0.165810225655
0 9:0.147218189589
0 10:0.147372219839
0 11:0.131483826454
1 2:0.899237555782
1 3:0.0468534344478
1 4:0.0428962323885
1 5:0.0298752465344
1 6:0.0414129981225
1 7:0.106938901236
1 8:0.026317359909
1 9:0.0397979014133
1 10:0.0394671573855
1 11:0.0595844655784
2 3:0.904928853973
2 4:0.900217635144
2 5:0.909831989648
2 6:0.919233791847
2 7:0.919617255653
2 8:0.886031336525
2 9:0.907663509501
2 10:0.907886112958
2 11:0.899935443234
3 4:0.0605076858353
3 5:0.0313491386429
3 6:0.0414413976364
3 7:0.116150034619
3 8:0.0556900227404
3 9:0.0288398827754
3 10:0.0294285866735
3 11:0.0716242389223
4 5:0.0377197023923
4 6:0.0343179506783
4 7:0.111751857852
4 8:0.0390764961645
4 9:0.0442763803134
4 10:0.0457192857542
4 11:0.0625853065616
5 6:0.0275376149447
5 7:0.103547933545
5 8:0.0402770656904
5 9:0.0187402716556
5 10:0.0192791525023
5 11:0.0547316371764
6 7:0.113901327942
6 8:0.046758588951
6 9:0.0302969123768
6 10:0.0320488138148
6 11:0.0676347336302
7 8:0.111953838668
7 9:0.112267216994
7 10:0.110996577358
7 11:0.0632101524806
8 9:0.0413145968641
8 10:0.0409383306054
8 11:0.055844293397
9 10:0.00351643109858
9 11:0.0586009558578
10 11:0.057034294471
</hsp>