sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3SKW-B19-B18
X
>1Q81-A1833-A1832
X
>3CCE-01833-01832
X
>2OTJ-01833-01832
X
>1VQ7-01833-01832
X
>3G71-01833-01832
X
>1JJ2-01833-01832
X
>3CME-01833-01832
X
>3CC4-01833-01832
X
>3CC2-01833-01832
X
>1VQO-01833-01832
X
</seq>
<hsp>
0 1:0.867942361093
0 2:0.913109897673
0 3:0.890693236672
0 4:0.946433296643
0 5:0.906385363286
0 6:1.0
0 7:0.901058053714
0 8:0.928266136113
0 9:0.964440100556
0 10:0.942788463909
1 2:0.0662745538616
1 3:0.0781194803783
1 4:0.103871776237
1 5:0.0534063377794
1 6:0.169557702916
1 7:0.0567900356131
1 8:0.0732301130441
1 9:0.131650599368
1 10:0.104709744834
2 3:0.0787098216872
2 4:0.101405285946
2 5:0.0511899121072
2 6:0.159505280314
2 7:0.0664664417305
2 8:0.0689140733385
2 9:0.128969794478
2 10:0.0956674381918
3 4:0.083713810572
3 5:0.0623064880622
3 6:0.152899123197
3 7:0.0580975931078
3 8:0.0638959451919
3 9:0.11525533785
3 10:0.0783304046327
4 5:0.0698650314522
4 6:0.0792754318106
4 7:0.0840639762831
4 8:0.0397797542389
4 9:0.041996729214
4 10:0.0321113866197
5 6:0.128317950975
5 7:0.0592125631797
5 8:0.0353697077627
5 9:0.0928937784267
5 10:0.0636243709395
6 7:0.15743947834
6 8:0.106074684355
6 9:0.0438576183492
6 10:0.0811249695276
7 8:0.059485412662
7 9:0.121445208029
7 10:0.0848779049031
8 9:0.0682715382737
8 10:0.045657587208
9 10:0.0523182225114
</hsp>