sequences=10
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHD-A1371-A1370
X
>3OHC-A1371-A1370
X
>2UXC-A1371-A1370
X
>3U5F-61625-61624
X
>3OI0-A1371-A1370
X
>3OHY-A1371-A1370
X
>2VQE-A1371-A1370
X
>2VQF-A1371-A1370
X
>2UUB-A1371-A1370
X
>1N32-A1371-A1370
X
</seq>
<hsp>
0 1:0.0891549085264
0 2:1.0
0 3:0.707128146051
0 4:0.485830517468
0 5:0.50338421963
0 6:0.886234331288
0 7:0.795374593612
0 8:0.776015163027
0 9:0.872865123805
1 2:0.951278076347
1 3:0.659496454465
1 4:0.432717584132
1 5:0.442920752981
1 6:0.843725476574
1 7:0.755162438393
1 8:0.732161904141
1 9:0.831251229693
2 3:0.515753932155
2 4:0.754901037661
2 5:0.712574318475
2 6:0.325985103091
2 7:0.394636317099
2 8:0.339298787052
2 9:0.256799310578
3 4:0.580405040164
3 5:0.546671419544
3 6:0.633196770245
3 7:0.620451173522
3 8:0.53901596274
3 9:0.558356739876
4 5:0.0685467855012
4 6:0.622094529952
4 7:0.597128922934
4 8:0.526265871624
4 9:0.636433448467
5 6:0.588060027412
5 7:0.56246171371
5 8:0.491091417866
5 9:0.600565311328
6 7:0.151931782505
6 8:0.1330906458
6 9:0.159647279908
7 8:0.148800840815
7 9:0.209357849059
8 9:0.193322761665
</hsp>