sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNH-A325-A324
X
>2J01-A2590-A2589
X
>2J03-A2590-A2589
X
>3OHC-A334-A333
X
>3OGY-A334-A333
X
>3U5D-11019-11018
X
>3U5H-51025-51024
X
>3U5H-52764-52763
X
</seq>
<hsp>
0 1:0.875054211323
0 2:0.873414312433
0 3:0.156559853464
0 4:0.182684270683
0 5:0.135438502673
0 6:0.119709343556
0 7:0.179649504446
1 2:0.00502429280559
1 3:0.966872795791
1 4:0.971648375543
1 5:0.93475449528
1 6:0.932747464219
1 7:1.0
2 3:0.965422515364
2 4:0.970342763991
2 5:0.933129009863
2 6:0.931114794634
2 7:0.99827439168
3 4:0.0514205842313
3 5:0.0716568853896
3 6:0.0748536999499
3 7:0.0733752291485
4 5:0.086533928788
4 6:0.0918019208758
4 7:0.111248681842
5 6:0.0314218153918
5 7:0.102879447659
6 7:0.104621953694
</hsp>