sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8O-A260-A259
X
>3KNI-A2469-A2468
X
>3OHY-A930-A929
X
>3OI0-A930-A929
X
>3U5B-2332-2331
X
>3U5H-51209-51208
X
>1QVG-02440-02439
X
>3OHJ-A2394-A2393
X
</seq>
<hsp>
0 1:0.918328515356
0 2:0.521541489719
0 3:0.532391862872
0 4:0.46358343256
0 5:0.81387468706
0 6:0.835780843232
0 7:0.999997731267
1 2:0.924264665621
1 3:0.918979220895
1 4:0.856684321106
1 5:0.751477659533
1 6:0.777710573271
1 7:0.84678527502
2 3:0.025877011106
2 4:0.14697979981
2 5:0.461953626263
2 6:0.442113428751
2 7:0.569271659644
3 4:0.146567251241
3 5:0.442082741119
3 6:0.425372698045
3 7:0.551931467292
4 5:0.449162133959
4 6:0.467782712774
4 7:0.586923888274
5 6:0.195903327386
5 7:0.324096375026
6 7:0.281594330272
</hsp>