sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8O-A30-A28
X
>3OI0-A27-A25
X
>3OHY-A27-A25
X
>3L3C-S93-S92
X
>3OI1-A2103-A2102
X
>3OHZ-A2103-A2102
X
>2ZJR-X2060-X2059
X
</seq>
<hsp>
0 1:0.0710712442787
0 2:0.0746365402629
0 3:0.325307132134
0 4:0.991954801146
0 5:0.980715175671
0 6:0.985624333285
1 2:0.0113904732578
1 3:0.334015619652
1 4:0.991407783159
1 5:0.979738511285
1 6:0.981653654885
2 3:0.34161743909
2 4:1.0
2 5:0.98831513492
2 6:0.989900932028
3 4:0.876834542492
3 5:0.867229245795
3 6:0.895476629606
4 5:0.0198067128017
4 6:0.0942079074216
5 6:0.0867669582978
</hsp>