sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-53128-53127
X
>3CCS-01862-01861
X
>3OHD-A1069-A1068
X
>3OHC-A1069-A1068
X
>3OI0-A1069-A1068
X
>3OHY-A1069-A1068
X
</seq>
<hsp>
0 1:0.746841700917
0 2:0.897854367363
0 3:0.89939395069
0 4:0.986256934904
0 5:0.983190760122
1 2:0.969196594858
1 3:0.973835066371
1 4:1.0
1 5:0.99884493281
2 3:0.00705858697619
2 4:0.165896606515
2 5:0.161320261572
3 4:0.167512760326
3 5:0.162889004877
4 5:0.00598703705616
</hsp>