sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1N32-A49-A343
X
>1FJG-A49-A343
X
>3U5F-649-6421
X
>2J00-A49-A343
X
>2UUA-A49-A343
X
>3U5B-249-2424
X
>2UUB-A49-A343
X
>3F1H-A472-A475
X
>2UXC-A49-A343
X
>3KNI-A465-A468
X
>2UUA-A342-A50
X
>2VQF-A342-A50
X
>3OHD-A342-A50
X
>3OHC-A342-A50
X
</seq>
<hsp>
0 1:0.0459872822294
0 2:0.0558844886167
0 3:0.0965030009363
0 4:0.0520393594424
0 5:0.0622540664658
0 6:0.0539425946341
0 7:0.874321122408
0 8:0.0519129616627
0 9:0.83602088662
0 10:0.97801227245
0 11:0.974463971828
0 12:0.974555980264
0 13:0.974447237994
1 2:0.085652364409
1 3:0.0758441102932
1 4:0.0496384436083
1 5:0.0955923489779
1 6:0.048553745619
1 7:0.844658496407
1 8:0.0497075573722
1 9:0.805660466856
1 10:0.947955092437
1 11:0.943983545037
1 12:0.943665014659
1 13:0.943436934428
2 3:0.141210502366
2 4:0.0853950971776
2 5:0.0366920659756
2 6:0.070076982167
2 7:0.880501848455
2 8:0.0813178238873
2 9:0.841018944653
2 10:0.995782636615
2 11:0.992036863332
2 12:0.994287843696
2 13:0.994287117799
3 4:0.109919491535
3 5:0.149090510535
3 6:0.0985299826394
3 7:0.85702724112
3 8:0.0946029187068
3 9:0.818104128737
3 10:0.954071529478
3 11:0.949889681328
3 12:0.945457299941
3 13:0.944881412887
4 5:0.080287163352
4 6:0.0616462872888
4 7:0.843148959672
4 8:0.0548437984761
4 9:0.80534170337
4 10:0.947119833369
4 11:0.943574565222
4 12:0.943624634382
4 13:0.943528260844
5 6:0.0719893616557
5 7:0.884941507752
5 8:0.0770020457082
5 9:0.846601201753
5 10:1.0
5 11:0.996422503115
5 12:0.998388485831
5 13:0.99840531603
6 7:0.855126760473
6 8:0.0252912883724
6 9:0.816345471593
6 10:0.971099743101
6 11:0.966538737169
6 12:0.967257283278
6 13:0.966879143791
7 8:0.861946518016
7 9:0.0794100836766
7 10:0.651136401997
7 11:0.633719818718
7 12:0.624576217824
7 13:0.621185149707
8 9:0.824491552026
8 10:0.971863176335
8 11:0.96758515244
8 12:0.968055143774
8 13:0.967676130468
9 10:0.632443141174
9 11:0.615456384787
9 12:0.606171380037
9 13:0.603097620897
10 11:0.0287993036019
10 12:0.06672328733
10 13:0.0702791832239
11 12:0.068520768127
11 13:0.068830067317
12 13:0.00969671000769
</hsp>