sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3FOZ-D9-D5
X
>3U5F-6172-6262
X
>1TN2-A12-A8
X
>2ZXU-C12-C8
X
>3R8O-V12-V8
X
>3U5H-52115-52090
X
>1H4S-T9-T5
X
>1EFW-C12-C8
X
>2ZJR-X1565-X1190
X
>6TNA-A12-A8
X
>4TNA-A12-A8
X
>1EFW-D12-D8
X
>4TRA-A12-A8
X
</seq>
<hsp>
0 1:0.531445783504
0 2:0.149132359931
0 3:0.0679267488364
0 4:0.0507227426365
0 5:0.477530405242
0 6:0.287612121214
0 7:0.0696952223711
0 8:0.692109047421
0 9:0.109115371749
0 10:0.142751627805
0 11:0.111958179731
0 12:0.0960584123753
1 2:0.627738709871
1 3:0.558124813711
1 4:0.552138058302
1 5:0.381421710363
1 6:0.755379073779
1 7:0.535668571299
1 8:0.987225593718
1 9:0.595531760352
1 10:0.618870289972
1 11:0.567298180256
1 12:0.581172026503
2 3:0.0901250590247
2 4:0.115056113498
2 5:0.571114300355
2 6:0.161171231834
2 7:0.166070881786
2 8:0.587073003671
2 9:0.0673297888519
2 10:0.0375817260785
2 11:0.0973038061184
2 12:0.0851164061649
3 4:0.050161107563
3 5:0.506879524436
3 6:0.238949494577
3 7:0.104346073551
3 8:0.649559640998
3 9:0.0611509620448
3 10:0.0860798279861
3 11:0.0682236694897
3 12:0.0535309967274
4 5:0.500538415901
4 6:0.250827050803
4 7:0.0778020954919
4 8:0.665622099972
4 9:0.0875494012307
4 10:0.107422458553
4 11:0.0895535546931
4 12:0.0809792387044
5 6:0.694968993248
5 7:0.47588140177
5 8:0.99999831578
5 9:0.549700458972
5 10:0.568205796245
5 11:0.525672735816
5 12:0.529130364654
6 7:0.286738410398
6 8:0.470493741236
6 9:0.19142063469
6 10:0.166656678084
6 11:0.227021236161
6 12:0.21855729279
7 8:0.688223025708
7 9:0.127732048516
7 10:0.150545887936
7 11:0.118151324237
7 12:0.109656475664
8 9:0.598881952764
8 10:0.588975295595
8 11:0.62601697364
8 12:0.624595658042
9 10:0.0577038771819
9 11:0.0691853259812
9 12:0.0421586398586
10 11:0.0705945568699
10 12:0.0661454515825
11 12:0.0417587763492
</hsp>