sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A26-A461
X
>3OH7-A26-A461
X
>1Q82-A2175-A2210
X
>1K9M-A2175-A2210
X
>1Q81-A2175-A2210
X
>1YI2-02175-02210
X
>3CXC-02175-02210
X
>1M90-A2175-A2210
X
>1YJ9-02175-02210
X
>1JJ2-02175-02210
X
>1K8A-A2175-A2210
X
>1VQ9-02175-02210
X
</seq>
<hsp>
0 1:0.591641700805
0 2:0.92664609234
0 3:0.934786421526
0 4:0.902641908454
0 5:1.0
0 6:0.88217854695
0 7:0.994772361838
0 8:0.90602965689
0 9:0.982638008853
0 10:0.94826459947
0 11:0.936104843172
1 2:0.792863071172
1 3:0.808209664566
1 4:0.80244905732
1 5:0.89089474492
1 6:0.798775623354
1 7:0.904275750205
1 8:0.812149664226
1 9:0.855386941473
1 10:0.837585013152
1 11:0.904298937385
2 3:0.136849789741
2 4:0.200682315267
2 5:0.113708562222
2 6:0.12850328635
2 7:0.142980320872
2 8:0.144100404735
2 9:0.102599056878
2 10:0.15563329297
2 11:0.199073535151
3 4:0.105402236809
3 5:0.164918572227
3 6:0.126626648029
3 7:0.153756619691
3 8:0.23643611691
3 9:0.150648647824
3 10:0.0696485234043
3 11:0.221093059099
4 5:0.209840848028
4 6:0.140847503919
4 7:0.193684747049
4 8:0.24585900485
4 9:0.202757429187
4 10:0.0837357999925
4 11:0.235202895762
5 6:0.142865031698
5 7:0.0704734183276
5 8:0.148391209865
5 9:0.0989419277212
5 10:0.155653150513
5 11:0.172025133904
6 7:0.13370983496
6 8:0.168123457178
6 9:0.158972314047
6 10:0.138876737253
6 11:0.188019626762
7 8:0.178445169179
7 9:0.0988710566167
7 10:0.142409599964
7 11:0.141404955571
8 9:0.155219488425
8 10:0.218379534577
8 11:0.182618313865
9 10:0.141081944366
9 11:0.157237879115
10 11:0.190575237265
</hsp>