sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCJ-02175-02210
X
>1F7Y-B14-B51
X
>1KUQ-B14-B51
X
>1FJG-A629-A731
X
>2VQF-A629-A731
X
>2UUB-A629-A731
X
>2UUA-A629-A731
X
>1XMQ-A629-A731
X
>2VQE-A629-A731
X
</seq>
<hsp>
0 1:0.559150169155
0 2:0.791037520662
0 3:0.864009321794
0 4:0.844919522137
0 5:0.832334820779
0 6:0.849485818002
0 7:1.0
0 8:0.890923742221
1 2:0.283075404755
1 3:0.550302312495
1 4:0.516488128525
1 5:0.493138865821
1 6:0.411391065898
1 7:0.63965372368
1 8:0.546859123139
2 3:0.469782981183
2 4:0.443897608088
2 5:0.413361976812
2 6:0.321934331891
2 7:0.497051334395
2 8:0.483641964255
3 4:0.265775969212
3 5:0.161859375985
3 6:0.269997193572
3 7:0.214033562521
3 8:0.272656240652
4 5:0.189594362558
4 6:0.350835007597
4 7:0.221762351392
4 8:0.195291211232
5 6:0.223674211255
5 7:0.239837710989
5 8:0.144152559109
6 7:0.35612222036
6 8:0.284383636164
7 8:0.284036295834
</hsp>