sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHJ-A799-A796
X
>3OHK-A799-A796
X
>3R8S-A790-A787
X
>2J01-A799-A796
X
>3OH7-A799-A796
X
>3OH5-A799-A796
X
>3OI1-A799-A796
X
>3R8T-A790-A787
X
>3KNK-A798-A795
X
</seq>
<hsp>
0 1:0.12757341462
0 2:0.429219886733
0 3:0.228982803663
0 4:0.271944322536
0 5:0.252944496978
0 6:0.235201720474
0 7:0.84110400457
0 8:0.605447659863
1 2:0.489269706774
1 3:0.310944902718
1 4:0.303009559615
1 5:0.312557041176
1 6:0.198934245155
1 7:0.90122714811
1 8:0.607268101572
2 3:0.467458321123
2 4:0.282111924165
2 5:0.231007776283
2 6:0.511441213162
2 7:0.466168848415
2 8:0.614421598354
3 4:0.393618476543
3 5:0.34726092838
3 6:0.379039886606
3 7:0.847684194994
3 8:0.615434477988
4 5:0.107246832508
4 6:0.27508488196
4 7:0.716712932485
4 8:0.550414640219
5 6:0.326525407392
5 7:0.665669188685
5 8:0.580660669519
6 7:0.952098298285
6 8:0.486211633827
7 8:1.0
</hsp>