sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1Q81-A156-A155
X
>1Q86-A156-A155
X
>3CCR-0156-0155
X
>1K9M-A156-A155
X
>1NJI-A156-A155
X
>1K8A-A156-A155
X
>3KNK-A135-A134
X
>3OH5-A2040-A2039
X
>3OH7-A2040-A2039
X
</seq>
<hsp>
0 1:0.0522101110494
0 2:0.132097261537
0 3:0.070115188784
0 4:0.0872613959291
0 5:0.0731177966222
0 6:0.928702014432
0 7:0.231076220023
0 8:0.231920456705
1 2:0.0918283496717
1 3:0.0504717365625
1 4:0.068496363328
1 5:0.057918544631
1 6:0.958385818187
1 7:0.239239081732
1 8:0.239390166864
2 3:0.118073940994
2 4:0.119738385417
2 5:0.127663027585
2 6:0.971730438233
2 7:0.305097676911
2 8:0.305688390804
3 4:0.0414335329151
3 5:0.0342980548014
3 6:0.955852456854
3 7:0.206389893537
3 8:0.206547948322
4 5:0.0505530787656
4 6:0.956680834089
4 7:0.204041317208
4 8:0.203909774342
5 6:0.945206864153
5 7:0.207024561298
5 8:0.206009500434
6 7:0.996561360256
6 8:0.999999111871
7 8:0.0139221423008
</hsp>