sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OI0-A1298-A1198
X
>3OHY-A1298-A1198
X
>3OGE-A1298-A1198
X
>3OGY-A1298-A1198
X
>3R8S-B10-B9
X
>3KNH-A1289-A1189
X
>2J02-A1298-A1198
X
>2J00-A1298-A1198
X
</seq>
<hsp>
0 1:0.0020294762515
0 2:0.0408664767594
0 3:0.0408574072529
0 4:0.970135686877
0 5:0.0540897860571
0 6:0.0585895525752
0 7:0.0582218675869
1 2:0.0398812893873
1 3:0.0398956860373
1 4:0.970050210931
1 5:0.0550984031868
1 6:0.0585074805835
1 7:0.0581633094331
2 3:0.00141867990042
2 4:0.965437624568
2 5:0.072926935978
2 6:0.0517410585434
2 7:0.0515780573018
3 4:0.964628613926
3 5:0.0729983477127
3 6:0.0515838396834
3 7:0.0513981908785
4 5:0.999998971826
4 6:0.989015753493
4 7:0.987476014203
5 6:0.049723813489
5 7:0.0495486458955
6 7:0.00308480115882
</hsp>