sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2QA4-01196-01199
X
>2UUA-A109-A226
X
>2VQE-A109-A226
X
>1XMQ-A109-A226
X
>1N32-A109-A226
X
>2UUB-A109-A226
X
>2UXC-A109-A226
X
>1FJG-A109-A226
X
</seq>
<hsp>
0 1:0.969782875982
0 2:0.891402182333
0 3:0.907930431311
0 4:0.931626856048
0 5:0.968893182528
0 6:0.943865113354
0 7:0.999996981236
1 2:0.242795863657
1 3:0.159718249215
1 4:0.23888797668
1 5:0.205009563769
1 6:0.214905995582
1 7:0.29805746175
2 3:0.205185043002
2 4:0.410636513987
2 5:0.277738878008
2 6:0.216101092096
2 7:0.40230929523
3 4:0.235779952432
3 5:0.234651676713
3 6:0.10861894303
3 7:0.312556086559
4 5:0.323734941177
4 6:0.300722782813
4 7:0.342733366484
5 6:0.25336468081
5 7:0.154634550331
6 7:0.31341194871
</hsp>