sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1XMQ-A461-A460
X
>2J01-A162-A161
X
>3OI1-A162-A161
X
>3F1F-A165-A164
X
>1Q82-A139-A138
X
>3OH5-A162-A161
X
>1VQ9-0139-0138
X
>1VQN-0139-0138
X
>3CC2-0139-0138
X
>1K9M-A139-A138
X
>2OTL-0139-0138
X
>1VQK-0139-0138
X
>1VQ7-0139-0138
X
>3CC4-0139-0138
X
>1VQ8-0139-0138
X
>3CCL-0139-0138
X
</seq>
<hsp>
0 1:0.869953801513
0 2:0.922886935191
0 3:0.865881697932
0 4:0.887546401959
0 5:0.870668974785
0 6:1.0
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0 15:0.938135004929
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1 11:0.307193219822
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1 15:0.363622334495
2 3:0.145414776932
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12 13:0.0499474148128
12 14:0.148747018606
12 15:0.0888151322635
13 14:0.127979028216
13 15:0.0786094433868
14 15:0.116311962831
</hsp>