sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OGE-A1144-A1143
X
>3OHD-A1144-A1143
X
>3KNI-A491-A490
X
>1M90-A680-A679
X
>3U5D-1653-1652
X
>2J01-A514-A513
X
>3RW6-H28-H27
X
>2VQF-A706-A705
X
>1YIJ-0793-0792
X
>3OHY-A1155-A1154
X
>1QVG-0793-0792
X
>2VQE-A706-A705
X
>3G6E-0793-0792
X
</seq>
<hsp>
0 1:0.162085205462
0 2:0.508448585567
0 3:0.913281483431
0 4:0.915572724249
0 5:0.558677396789
0 6:0.797930932981
0 7:0.704640766933
0 8:0.56139227722
0 9:0.714833632931
0 10:0.645976280321
0 11:0.701023370068
0 12:0.690406730621
1 2:0.625068872397
1 3:0.987133679156
1 4:1.0
1 5:0.639466927326
1 6:0.871428234642
1 7:0.788992480205
1 8:0.647767918704
1 9:0.806227251318
1 10:0.7225891845
1 11:0.789404143366
1 12:0.76740483705
2 3:0.847694609475
2 4:0.608462817731
2 5:0.285565109065
2 6:0.751043759625
2 7:0.454442499167
2 8:0.472219169214
2 9:0.713850457638
2 10:0.735038854226
2 11:0.443246335662
2 12:0.570729346188
3 4:0.57774001422
3 5:0.683564727393
3 6:0.3733153698
3 7:0.503112085705
3 8:0.477580192759
3 9:0.370699077126
3 10:0.373408801311
3 11:0.531239114478
3 12:0.355681695182
4 5:0.516807718654
4 6:0.662577057371
4 7:0.442278392273
4 8:0.560173520254
4 9:0.560007783295
4 10:0.73028940889
4 11:0.470799845963
4 12:0.486633323858
5 6:0.564733312968
5 7:0.232130101935
5 8:0.278487483901
5 9:0.651157822759
5 10:0.601253844451
5 11:0.222028093484
5 12:0.358446147244
6 7:0.421351057503
6 8:0.33235270711
6 9:0.532115757172
6 10:0.303231868289
6 11:0.426374347169
6 12:0.325214444637
7 8:0.224073563503
7 9:0.577724614219
7 10:0.514394366493
7 11:0.0596285010819
7 12:0.210784568838
8 9:0.485729424695
8 10:0.336539264121
8 11:0.219131867473
8 12:0.168768952422
9 10:0.364629140404
9 11:0.598332354771
9 12:0.444259337703
10 11:0.519676759071
10 12:0.352412359531
11 12:0.229177298026
</hsp>