sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OXD-B79-B78
X
>3OWZ-A80-A79
X
>2J01-A1399-A1398
X
>3R8S-A1882-A1881
X
>3CCL-0733-0732
X
>2OTL-02722-02721
X
>3DJ0-A20-A19
X
>3CMA-02722-02721
X
>1Q82-A2722-A2721
X
>1M90-A2722-A2721
X
>1YI2-02722-02721
X
</seq>
<hsp>
0 1:0.107955965159
0 2:0.810513438818
0 3:0.167615703684
0 4:0.335470560441
0 5:0.274941153686
0 6:0.265325407068
0 7:0.237965791342
0 8:0.228549045158
0 9:0.237529145156
0 10:0.226000307524
1 2:0.714269110236
1 3:0.144901728776
1 4:0.374738946682
1 5:0.22914617422
1 6:0.206721636287
1 7:0.207740976646
1 8:0.195510539834
1 9:0.207066156874
1 10:0.19693734669
2 3:0.744800807672
2 4:0.999999563324
2 5:0.616024184161
2 6:0.62157450241
2 7:0.660283483712
2 8:0.660971212492
2 9:0.65825459674
2 10:0.66333799321
3 4:0.311382491018
3 5:0.273001672807
3 6:0.215378281134
3 7:0.234157065342
3 8:0.250036091452
3 9:0.257212398168
3 10:0.233911959471
4 5:0.483543857618
4 6:0.425855434006
4 7:0.438001592959
4 8:0.446687891937
4 9:0.458150968129
4 10:0.44149272711
5 6:0.133749998831
5 7:0.0735215420858
5 8:0.0567764949479
5 9:0.0493537069529
5 10:0.0594813436362
6 7:0.103280834413
6 8:0.134655482634
6 9:0.144899506423
6 10:0.131216767686
7 8:0.0574774584849
7 9:0.0604299462701
7 10:0.0451827587057
8 9:0.0226491349058
8 10:0.0357902519425
9 10:0.0289672884222
</hsp>