sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5F-61080-61079
X
>3DW5-A13-A12
X
>1XMQ-A149-A148
X
>3MUT-R25-R24
X
>3E5E-A42-A41
X
>430D-A14-A13
X
>1VQ6-01588-01587
X
>1NJI-A793-A792
X
>3CCU-0793-0792
X
>3NPQ-B21-B20
X
>3R8S-A630-A629
X
</seq>
<hsp>
0 1:0.573985078658
0 2:0.294669219693
0 3:0.565163472279
0 4:0.585130268258
0 5:0.424644540517
0 6:0.594928691036
0 7:0.491517266412
0 8:0.560592936066
0 9:0.454816491983
0 10:0.789837848873
1 2:0.598629698949
1 3:0.450189409775
1 4:0.452228428295
1 5:0.492200031104
1 6:0.708442053023
1 7:0.690748733086
1 8:0.615853415606
1 9:0.534896389923
1 10:0.822835339654
2 3:0.387351621067
2 4:0.458594237094
2 5:0.281442492159
2 6:0.378352178996
2 7:0.306987397922
2 8:0.464203748995
2 9:0.323974704354
2 10:0.77289815056
3 4:0.25687175076
3 5:0.300445314157
3 6:0.331497047039
3 7:0.375470579755
3 8:0.460084968563
3 9:0.389187688938
3 10:0.837769404825
4 5:0.241955449884
4 6:0.460784586605
4 7:0.360820109252
4 8:0.281287189797
4 9:0.335294577877
4 10:0.757224508639
5 6:0.420213296722
5 7:0.272582751916
5 8:0.24038710313
5 9:0.189860017074
5 10:0.641250153163
6 7:0.269069029121
6 8:0.562389832307
6 9:0.545145703431
6 10:1.0
7 8:0.341164378406
7 9:0.389809921761
7 10:0.832434993935
8 9:0.265274360835
8 10:0.592070425912
9 10:0.510047021401
</hsp>