sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2OTJ-01564-01563
X
>3R8T-A512-A511
X
>1Q86-A1564-A1563
X
>3R8S-A704-A703
X
>3CC7-01564-01563
X
>1Q82-A1564-A1563
X
>1S72-01564-01563
X
>1YHQ-01564-01563
X
</seq>
<hsp>
0 1:0.814553759082
0 2:0.225198075975
0 3:0.78930709708
0 4:0.161245935234
0 5:0.311530238139
0 6:0.363243089705
0 7:0.312609415156
1 2:0.844794908545
1 3:0.532384801546
1 4:0.719107037212
1 5:0.928614522085
1 6:0.93490196504
1 7:0.905103277056
2 3:0.876639849068
2 4:0.299293830641
2 5:0.253715994419
2 6:0.288454939805
2 7:0.278192257799
3 4:0.728805423947
3 5:0.971270574846
3 6:0.999991709372
3 7:0.921608584228
4 5:0.308200962326
4 6:0.345597581901
4 7:0.290425356951
5 6:0.114944920714
5 7:0.162363286165
6 7:0.127216650228
</hsp>