sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1K9M-A38-A37
X
>1KD1-A38-A37
X
>3R8S-A446-A445
X
>3CCJ-0507-0506
X
>3U5D-439-438
X
>2J02-A272-A271
X
>3F1G-A272-A271
X
>3R8O-A280-A279
X
</seq>
<hsp>
0 1:0.0662104781637
0 2:0.480019440616
0 3:1.0
0 4:0.228675397006
0 5:0.462729998899
0 6:0.684404664658
0 7:0.489698213001
1 2:0.453937870603
1 3:0.958216465546
1 4:0.196753699799
1 5:0.441194204906
1 6:0.660615414369
1 7:0.466322992168
2 3:0.675998174953
2 4:0.472388015453
2 5:0.421623267366
2 6:0.605975169299
2 7:0.547982187211
3 4:0.874718417974
3 5:0.743188091522
3 6:0.692291271032
3 7:0.745913938699
4 5:0.473316945061
4 6:0.640525352345
4 7:0.401562240399
5 6:0.266263849763
5 7:0.272498185369
6 7:0.289289507584
</hsp>