sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2D2K-B7-B6
X
>3F1H-A22-A21
X
>3F1F-A22-A21
X
>3OHZ-A1421-A1420
X
>3KNI-A1427-A1426
X
>3KNK-A1426-A1425
X
</seq>
<hsp>
0 1:0.242574483498
0 2:0.239518794894
0 3:0.690946493266
0 4:0.691679076476
0 5:0.928439118519
1 2:0.0185438949263
1 3:0.77640629089
1 4:0.791620472077
1 5:0.995499532527
2 3:0.781102058191
2 4:0.796595698666
2 5:1.0
3 4:0.138468856327
3 5:0.26494342286
4 5:0.287749232934
</hsp>