sequences=23
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCJ-0585-0584
X
>2J02-A715-A714
X
>3MOJ-A8-A7
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>3KNK-A430-A429
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>3CCR-01694-01693
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>2J02-A1221-A1220
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>2J01-A1051-A1050
X
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X
>1K8A-A2031-A2030
X
>3CCR-0585-0584
X
>2J02-A328-A327
X
>1FFK-01578-01577
X
>2J00-A328-A327
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>3KNI-A1367-A1366
X
>1XOK-A6-A5
X
>3IRW-R58-R57
X
>1YJ9-01625-01624
X
>3OHY-A1390-A1389
X
>3OI0-A1390-A1389
X
>3OHC-A1390-A1389
X
>3OGE-A1390-A1389
X
</seq>
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