sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OGY-A50-A49
X
>2UUA-A1237-A1236
X
>3OGE-A50-A49
X
>1N32-A1237-A1236
X
>1FJG-A1237-A1236
X
>3U5H-52847-52846
X
>3R8O-A1466-A1465
X
>3KNH-A1228-A1227
X
>3U5D-12846-12845
X
</seq>
<hsp>
0 1:0.281116907533
0 2:0.0119291600621
0 3:0.333388923692
0 4:0.176797979653
0 5:0.944616640425
0 6:0.477878070804
0 7:0.366374912801
0 8:0.927354253274
1 2:0.275648875835
1 3:0.145338027801
1 4:0.191374634679
1 5:0.866842283191
1 6:0.712118521022
1 7:0.3227173934
1 8:0.853212510642
2 3:0.327892097436
2 4:0.172708240105
2 5:0.941799348126
2 6:0.481411578055
2 7:0.362070701498
2 8:0.924479717897
3 4:0.240919425342
3 5:0.843422103916
3 6:0.734296548327
3 7:0.225210320966
3 8:0.830824529645
4 5:0.821312586074
4 6:0.530005664116
4 7:0.269923106778
4 8:0.804693545892
5 6:0.999998401553
5 7:0.744821792682
5 8:0.06320312046
6 7:0.622105096962
6 8:0.977190238681
7 8:0.73123214137
</hsp>