sequences=17
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CMA-01239-01237
X
>1VQK-01239-01237
X
>3CPW-01239-01237
X
>3CC2-01239-01237
X
>1S72-01239-01237
X
>3G6E-01239-01237
X
>1M90-A1239-A1237
X
>1VQ7-01239-01237
X
>2OTL-01239-01237
X
>1VQP-01239-01237
X
>1VQ5-01239-01237
X
>1VQ4-01239-01237
X
>1YJW-01239-01237
X
>3CME-01239-01237
X
>3I56-01239-01237
X
>3OH7-A959-A957
X
>3OHK-A959-A957
X
</seq>
<hsp>
0 1:0.133640885826
0 2:0.178633246782
0 3:0.181774222827
0 4:0.153732801896
0 5:0.24367516878
0 6:0.192626827444
0 7:0.153311165131
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0 9:0.171473764541
0 10:0.192116431528
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0 12:0.272250443862
0 13:0.132486152412
0 14:0.252178113485
0 15:0.861607335201
0 16:0.846075030282
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1 8:0.238965057028
1 9:0.0619280470458
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1 11:0.175701211547
1 12:0.17497863882
1 13:0.185371988529
1 14:0.303242925101
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1 16:0.92626662752
2 3:0.0798485539779
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3 4:0.10374582738
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3 16:0.875839203547
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5 14:0.339081637787
5 15:1.0
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7 8:0.149696015252
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7 12:0.184474411165
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7 14:0.275859998507
7 15:0.891110171877
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8 9:0.267518460706
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8 16:0.986936669094
9 10:0.158332123816
9 11:0.195555454326
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10 11:0.0804799719268
10 12:0.157940911118
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11 12:0.126060549973
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12 13:0.282460135793
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13 14:0.164241909692
13 15:0.825006551342
13 16:0.810047908679
14 15:0.784169842131
14 16:0.764407698225
15 16:0.104388407897
</hsp>