sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3IRW-R16-R15
X
>3MXH-R16-R15
X
>2QA4-02729-02728
X
>3CCJ-02730-02729
X
>1VQ5-02730-02729
X
>2QEX-02730-02729
X
>1JJ2-02730-02729
X
>1K9M-A2730-A2729
X
>1Q81-A2730-A2729
X
>3CCR-02730-02729
X
>3CCS-02730-02729
X
</seq>
<hsp>
0 1:0.037753575289
0 2:0.908125172108
0 3:0.958393503873
0 4:0.92931161067
0 5:0.88895776152
0 6:0.944976296732
0 7:0.942716247262
0 8:0.935851724917
0 9:0.969563379222
0 10:1.0
1 2:0.902256729208
1 3:0.948851335016
1 4:0.924484312248
1 5:0.884781700282
1 6:0.939351092305
1 7:0.9373599142
1 8:0.930593397792
1 9:0.962494139486
1 10:0.991970508499
2 3:0.227483450008
2 4:0.0538130225577
2 5:0.125588091171
2 6:0.078381551129
2 7:0.0719782952025
2 8:0.0911583975656
2 9:0.124300263147
2 10:0.136110695478
3 4:0.264650556712
3 5:0.345062527761
3 6:0.271764733134
3 7:0.269442397203
3 8:0.282039558357
3 9:0.272662171531
3 10:0.224269380466
4 5:0.0985889065833
4 6:0.0498570418995
4 7:0.0437618607651
4 8:0.0693909320381
4 9:0.11369189552
4 10:0.137267544976
5 6:0.096707376738
5 7:0.0956314880276
5 8:0.0858833683722
5 9:0.13532842363
5 10:0.191741010662
6 7:0.0131281836719
6 8:0.0353335116558
6 9:0.0757153433925
6 10:0.110692397841
7 8:0.0366901925074
7 9:0.08046170671
7 10:0.113347700602
8 9:0.0671161011047
8 10:0.116531855942
9 10:0.0678507712243
</hsp>