sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>7MSF-S4-S3
X
>3OWZ-B59-B58
X
>3OXE-A64-A63
X
>3OWI-A64-A63
X
>3OWW-B63-B62
X
>3OXM-A64-A63
X
>3OXM-B64-B63
X
>3OWI-B64-B63
X
</seq>
<hsp>
0 1:0.955073261032
0 2:0.628901456406
0 3:0.673132741825
0 4:1.0
0 5:0.645175378623
0 6:0.72303211621
0 7:0.80450372627
1 2:0.470850863737
1 3:0.420609163569
1 4:0.188104294074
1 5:0.36984851389
1 6:0.366961601493
1 7:0.236403937659
2 3:0.0975746727439
2 4:0.472753464885
2 5:0.128269051614
2 6:0.221921485946
2 7:0.307034977089
3 4:0.443407827426
3 5:0.113177368014
3 6:0.160575981223
3 7:0.296830270313
4 5:0.393596005786
4 6:0.389467942746
4 7:0.20636942871
5 6:0.163655571029
5 7:0.217231616336
6 7:0.262390391758
</hsp>