sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3G78-A119-A245
X
>1N8R-A2309-A2308
X
>3CD6-02309-02308
X
>1Q81-A2309-A2308
X
>3G71-02309-02308
X
>1Q82-A2309-A2308
X
>1K9M-A2309-A2308
X
>1K8A-A2309-A2308
X
</seq>
<hsp>
0 1:0.970542868914
0 2:0.955953939616
0 3:1.0
0 4:0.941409181034
0 5:0.996206094682
0 6:0.976183539382
0 7:0.985213144191
1 2:0.0876529746461
1 3:0.0457092009736
1 4:0.0776233861267
1 5:0.0427191094432
1 6:0.0448802615561
1 7:0.0364191208388
2 3:0.0889912376633
2 4:0.04619419165
2 5:0.0990343866783
2 6:0.0828778342019
2 7:0.0919078029718
3 4:0.0829941233748
3 5:0.0469688907798
3 6:0.0439912474662
3 7:0.0412833517172
4 5:0.0948523728162
4 6:0.0619798791444
4 7:0.0764551128939
5 6:0.0516742515243
5 7:0.0330543006396
6 7:0.0220354387569
</hsp>