sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1NJI-A620-A618
X
>1FFK-0619-0617
X
>3CCV-0620-0618
X
>1N8R-A620-A618
X
>3CCJ-0620-0618
X
>3CME-0620-0618
X
>1YJW-0620-0618
X
>3KNI-A518-A515
X
</seq>
<hsp>
0 1:0.0287016321334
0 2:0.0209297640655
0 3:0.0279218962838
0 4:0.0498099966436
0 5:0.0528109046464
0 6:0.0269555125525
0 7:0.952582277672
1 2:0.0155325768562
1 3:0.0420614399122
1 4:0.0489536572208
1 5:0.0502404991923
1 6:0.030316853224
1 7:0.95755144171
2 3:0.0318266418334
2 4:0.0536200769348
2 5:0.0436919528183
2 6:0.0235889217355
2 7:0.962110302019
3 4:0.0610538968154
3 5:0.042411236663
3 6:0.0307391670775
3 7:0.967876977347
4 5:0.0736811463035
4 6:0.0620605061885
4 7:0.935832278538
5 6:0.0363521817776
5 7:0.999999806552
6 7:0.97102979555
</hsp>