sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3Q51-A30-A29
X
>3OXM-B21-B20
X
>2QUS-B51-B50
X
>3F1F-A1871-A1870
X
>3U5F-6194-6193
X
>3R8T-A1584-A1583
X
</seq>
<hsp>
0 1:0.706385001185
0 2:0.0707563850234
0 3:0.484257007321
0 4:0.0884800931227
0 5:0.429846871164
1 2:0.71789473265
1 3:0.999999813956
1 4:0.762075616277
1 5:0.978480201265
2 3:0.520093749313
2 4:0.125673039916
2 5:0.464732963212
3 4:0.411955763287
3 5:0.0827059561341
4 5:0.360615081766
</hsp>