sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OGE-A1279-A1277
X
>3OGY-A1279-A1277
X
>3F1E-A1279-A1277
X
>3F1G-A1279-A1277
X
>2UUA-A1279-A1277
X
>3R8O-A1301-A1299
X
>1XMQ-A1274-A1272
X
>2VQF-A1279-A1277
X
>2VQE-A1279-A1277
X
>2UUB-A1279-A1277
X
>2UXC-A1279-A1277
X
>1FJG-A1279-A1277
X
</seq>
<hsp>
0 1:0.017062238421
0 2:0.743693082407
0 3:0.734469299922
0 4:0.817497487871
0 5:0.999995859052
0 6:0.870270019906
0 7:0.808201707218
0 8:0.807601491844
0 9:0.791849946945
0 10:0.8149824967
0 11:0.88234070305
1 2:0.746321917726
1 3:0.736872207947
1 4:0.817140191144
1 5:0.999633939783
1 6:0.872544115999
1 7:0.80767553092
1 8:0.808655955331
1 9:0.790895164183
1 10:0.81539251457
1 11:0.882894178892
2 3:0.0192386538198
2 4:0.535489466871
2 5:0.620032675656
2 6:0.521578507502
2 7:0.503768484862
2 8:0.48259048756
2 9:0.51416614912
2 10:0.530126369708
2 11:0.521397337376
3 4:0.527389696862
3 5:0.617356675116
3 6:0.514805018996
3 7:0.492960927579
3 8:0.473023172551
3 9:0.503557476198
3 10:0.520210255822
3 11:0.512876518906
4 5:0.482867870117
4 6:0.232832628792
4 7:0.223071307421
4 8:0.292558834467
4 9:0.148311858184
4 10:0.220110099933
4 11:0.236111505382
5 6:0.538479518771
5 7:0.494458393991
5 8:0.508357921005
5 9:0.529328694287
5 10:0.615253802906
5 11:0.609317014631
6 7:0.194546705204
6 8:0.171944193081
6 9:0.191811796094
6 10:0.163924891492
6 11:0.163988646805
7 8:0.160304639501
7 9:0.120637579935
7 10:0.16188338031
7 11:0.19357882187
8 9:0.200436305491
8 10:0.220144332169
8 11:0.25190839184
9 10:0.122044114194
9 11:0.161143459099
10 11:0.0953099483275
</hsp>