sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHZ-A1881-A1856
X
>3R8T-A1957-A1932
X
>3OI1-A1881-A1856
X
>3F1H-A1959-A1934
X
>3F1F-A1959-A1934
X
>3OH5-A1881-A1856
X
>3OH7-A1881-A1856
X
>3OHJ-A1881-A1856
X
>3OHK-A1881-A1856
X
>2J03-A1881-A1856
X
>2J01-A1881-A1856
X
</seq>
<hsp>
0 1:0.902670839391
0 2:0.135547175082
0 3:0.953064090214
0 4:0.928220186369
0 5:0.63650839225
0 6:0.69926104368
0 7:0.848940623279
0 8:0.876212894527
0 9:0.951116974241
0 10:0.999997483928
1 2:0.872689303797
1 3:0.800153039232
1 4:0.805902754577
1 5:0.682955347602
1 6:0.701905086338
1 7:0.631069789107
1 8:0.729987822486
1 9:0.88353185577
1 10:0.91349985137
2 3:0.874606023771
2 4:0.850355094275
2 5:0.651949243705
2 6:0.70650683857
2 7:0.818308149974
2 8:0.842132448501
2 9:0.901363814346
2 10:0.948529357199
3 4:0.0819264114112
3 5:0.809476688092
3 6:0.828859039679
3 7:0.753655683842
3 8:0.767962408215
3 9:0.633383787023
3 10:0.652138386555
4 5:0.77091619519
4 6:0.784501527725
4 7:0.71362862762
4 8:0.72261676679
4 9:0.61373841825
4 10:0.636766918664
5 6:0.107423414759
5 7:0.409702341895
5 8:0.432924672309
5 9:0.643326407413
5 10:0.698445527526
6 7:0.37194693801
6 8:0.384557044867
6 9:0.646785418608
6 10:0.701075760545
7 8:0.123380766123
7 9:0.496781045421
7 10:0.543244530126
8 9:0.447484420471
8 10:0.49308385882
9 10:0.0670622217764
</hsp>