sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2VQE-A1258-A1257
X
>2BH2-C25-C24
X
>2UXC-A1258-A1257
X
>2UUA-A1258-A1257
X
>3F1G-A1258-A1257
X
>3F1E-A1258-A1257
X
>2UUB-A1258-A1257
X
>1H4Q-T58-T57
X
>1Q81-A1466-A1465
X
>2DRB-B19-B18
X
>1FJG-A1258-A1257
X
</seq>
<hsp>
0 1:0.794886646063
0 2:0.278369058452
0 3:0.162404002715
0 4:0.411009325057
0 5:0.410917644056
0 6:0.278867911841
0 7:0.719172260272
0 8:0.78314103096
0 9:0.726318069552
0 10:0.567345766191
1 2:0.875434921574
1 3:0.859878430274
1 4:0.925930490219
1 5:0.927633318188
1 6:0.951352117838
1 7:0.546324251899
1 8:0.591101832759
1 9:0.698780574498
1 10:1.0
2 3:0.179808096529
2 4:0.301895530118
2 5:0.303910849058
2 6:0.148283864068
2 7:0.626791431313
2 8:0.699380406133
2 9:0.572019406949
2 10:0.29645279586
3 4:0.365856821705
3 5:0.36670971195
3 6:0.168841106523
3 7:0.695734775064
3 8:0.772512667631
3 9:0.673148719835
3 10:0.461784542383
4 5:0.00737469870821
4 6:0.318790426171
4 7:0.670561349201
4 8:0.697079195588
4 9:0.685240657656
4 10:0.395251198547
5 6:0.318515692649
5 7:0.673699211784
5 8:0.698994728457
5 9:0.68839451816
5 10:0.398110973522
6 7:0.728825647279
6 8:0.785326143656
6 9:0.675612895292
6 10:0.363869995108
7 8:0.185211177962
7 9:0.232163166111
7 10:0.614052025564
8 9:0.333119815171
8 10:0.672866472178
9 10:0.501050856195
</hsp>