sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2UUA-A818-A817
X
>2VQF-A818-A817
X
>2VQE-A818-A817
X
>2QEX-01433-01432
X
>1VQN-01433-01432
X
>1VQ9-01433-01432
X
</seq>
<hsp>
0 1:0.402356277405
0 2:0.379608997536
0 3:0.694847790934
0 4:0.756806218542
0 5:0.792935211754
1 2:0.318013212861
1 3:0.808888036231
1 4:0.810276403309
1 5:0.864861923731
2 3:0.922495226356
2 4:0.957578057873
2 5:1.0
3 4:0.16281444862
3 5:0.149693825915
4 5:0.0747345148714
</hsp>