sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5F-61191-61170
X
>1XMQ-A944-A923
X
>2UUB-A944-A923
X
>2UXC-A944-A923
X
>2UUA-A944-A923
X
>3R8O-A970-A949
X
>1FJG-A944-A923
X
</seq>
<hsp>
0 1:0.838039719652
0 2:0.722456293055
0 3:0.797560218905
0 4:0.60966485621
0 5:0.999998683267
0 6:0.79825554353
1 2:0.248765295249
1 3:0.196131354633
1 4:0.376849534802
1 5:0.58459581834
1 6:0.463376795615
2 3:0.140022094868
2 4:0.212863151501
2 5:0.514963689565
2 6:0.32187570144
3 4:0.249574959933
3 5:0.576938383521
3 6:0.366211653226
4 5:0.648827972475
4 6:0.323555291041
5 6:0.464473210772
</hsp>