sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OH5-A2581-A2583
X
>3OH7-A2581-A2583
X
>3CD6-964-966
X
>1YIT-964-966
X
>1YJN-964-966
X
>3I56-964-966
X
>1Q86-B64-B66
X
</seq>
<hsp>
0 1:0.0576731121124
0 2:0.990442547411
0 3:0.929471526813
0 4:0.821768475591
0 5:0.773463823649
0 6:0.903589631845
1 2:0.999995944172
1 3:0.936165345923
1 4:0.832402128188
1 5:0.777015789022
1 6:0.909197642786
2 3:0.373156911606
2 4:0.387681554853
2 5:0.602365773646
2 6:0.474732578935
3 4:0.274647792637
3 5:0.314024394948
3 6:0.161026239266
4 5:0.320977424492
4 6:0.338570842519
5 6:0.235153834035
</hsp>