sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OGE-A730-A632
X
>3OGY-A730-A632
X
>3OGY-A1035-A1178
X
>3OGE-A1035-A1178
X
>3OHD-A1035-A1178
X
>3OHC-A1035-A1178
X
>3R8O-A750-A652
X
>3U5F-61272-61427
X
>3OHY-A1035-A1178
X
>3OI0-A1035-A1178
X
>3F1G-A1035-A1178
X
>3F1E-A1035-A1178
X
</seq>
<hsp>
0 1:0.0249134827293
0 2:0.991487292775
0 3:0.98641541665
0 4:0.938547202703
0 5:0.931475294988
0 6:0.339163830121
0 7:0.857636721099
0 8:0.998126563569
0 9:1.0
0 10:0.852742861899
0 11:0.857259513394
1 2:0.988605601377
1 3:0.98342979773
1 4:0.934519865166
1 5:0.927376390758
1 6:0.325290644589
1 7:0.852479679044
1 8:0.993984998891
1 9:0.995955979303
1 10:0.844987379745
1 11:0.849437210972
2 3:0.0155314560952
2 4:0.146867471337
2 5:0.146677576326
2 6:0.834755337457
2 7:0.2648942828
2 8:0.250912001403
2 9:0.24054552116
2 10:0.302739909733
2 11:0.303771528276
3 4:0.148238102069
3 5:0.146564788398
3 6:0.829250105095
3 7:0.257520686612
3 8:0.241232979433
3 9:0.231486956805
3 10:0.298236265698
3 11:0.299740576554
4 5:0.0156924190277
4 6:0.78252672211
4 7:0.259491047834
4 8:0.246570407352
4 9:0.235057170911
4 10:0.234586955154
4 11:0.232520666219
5 6:0.775755472881
5 7:0.254783478387
5 8:0.239999801
5 9:0.229148133596
5 10:0.231179553151
5 11:0.229701346814
6 7:0.701608671008
6 8:0.858046877636
6 9:0.859204256449
6 10:0.650714980008
6 11:0.656826363939
7 8:0.26732172968
7 9:0.265952347373
7 10:0.207747872159
7 11:0.207664039883
8 9:0.0174079224634
8 10:0.344028061269
8 11:0.345402329192
9 10:0.339182225565
9 11:0.340214362535
10 11:0.0177941791493
</hsp>