sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1F-A1490-A1540
X
>3OI1-A1420-A1471
X
>3OHZ-A1420-A1471
X
>3U5D-1686-1671
X
>3OHK-A1420-A1471
X
>3OHJ-A1420-A1471
X
>3U5H-5692-5677
X
>2J03-A1420-A1471
X
>2J01-A1420-A1471
X
</seq>
<hsp>
0 1:0.693975261879
0 2:0.69005308751
0 3:0.834314961781
0 4:0.879922318415
0 5:0.844091885654
0 6:0.802677984291
0 7:0.801605163872
0 8:0.789311761952
1 2:0.0453294574227
1 3:0.850143683835
1 4:0.264710122632
1 5:0.235609478903
1 6:0.859997192105
1 7:0.593340443392
1 8:0.571663183556
2 3:0.833100557303
2 4:0.270007053957
2 5:0.236982752236
2 6:0.852399643958
2 7:0.574731307283
2 8:0.553026860779
3 4:0.989278276774
3 5:0.955886410878
3 6:0.264538481501
3 7:0.435908000189
3 8:0.436567284543
4 5:0.0508369781587
4 6:1.0
4 7:0.748318607743
4 8:0.73192518113
5 6:0.968738761176
5 7:0.712724245762
5 8:0.696601531239
6 7:0.481397224463
6 8:0.486293723797
7 8:0.0345520830847
</hsp>