sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A1379-A1513
X
>3F1H-A1444-A1592
X
>3F1F-A1444-A1592
X
>2V3C-N75-N62
X
>2V3C-M75-M62
X
>2PXD-B32-B19
X
</seq>
<hsp>
0 1:0.411955396998
0 2:0.440466481049
0 3:0.828294179842
0 4:0.739490877108
0 5:0.97338416515
1 2:0.0412252527132
1 3:0.744884516817
1 4:0.773554447241
1 5:1.0
2 3:0.731864780343
2 4:0.771155842611
2 5:0.993867058122
3 4:0.287316889024
3 5:0.524112954243
4 5:0.437858955507
</hsp>