sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OGE-A663-A683
X
>2J01-A75-A96
X
>2J03-A75-A96
X
>3OI0-A668-A675
X
>3OGE-A668-A675
X
>3OGY-A668-A675
X
>3OHY-A668-A675
X
>2P7F-B6-A6
X
>3F1H-A75-A96
X
>3F1F-A75-A96
X
>3I2R-B6-A6
X
>1FJG-A663-A683
X
</seq>
<hsp>
0 1:0.758335274857
0 2:0.762880663556
0 3:0.609698989655
0 4:0.360756609786
0 5:0.388585492288
0 6:0.586366710654
0 7:0.99999866734
0 8:0.561633958636
0 9:0.565820696036
0 10:0.971451709673
0 11:0.641506826583
1 2:0.0399664271414
1 3:0.412331746506
1 4:0.477566304942
1 5:0.468335238828
1 6:0.420328161212
1 7:0.833952198928
1 8:0.59818857104
1 9:0.598017373197
1 10:0.848704792304
1 11:0.662446251232
2 3:0.425197391368
2 4:0.490571243556
2 5:0.480599638554
2 6:0.43426148756
2 7:0.841245230572
2 8:0.610211850999
2 9:0.610397074048
2 10:0.855171450394
2 11:0.673778779236
3 4:0.391234504761
3 5:0.382131266198
3 6:0.049653449929
3 7:0.663745682204
3 8:0.313905355877
3 9:0.314320544385
3 10:0.608815841614
3 11:0.309768337636
4 5:0.0604239316148
4 6:0.375200626977
4 7:0.82874537788
4 8:0.428818099954
4 9:0.430494558315
4 10:0.863760761943
4 11:0.536298964202
5 6:0.373051771306
5 7:0.799369619547
5 8:0.415712855953
5 9:0.417254939716
5 10:0.845085190328
5 11:0.527983791812
6 7:0.688054903102
6 8:0.315381942102
6 9:0.31580191078
6 10:0.628222641488
6 11:0.310844234524
7 8:0.513210540479
7 9:0.505803152818
7 10:0.344471727324
7 11:0.519342382092
8 9:0.0196624914769
8 10:0.483708124021
8 11:0.205645992802
9 10:0.476773167031
9 11:0.199314717855
10 11:0.401715219869
</hsp>