sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5D-4135-111
X
>3R8T-A1994-A1266
X
>3R8S-A1995-A1266
X
>3OH5-A1918-A1222
X
>3OH7-A1918-A1222
X
>3U5H-51612-51672
X
>3OHK-A1918-A1222
X
>3KNK-A1917-A1227
X
</seq>
<hsp>
0 1:0.578348184115
0 2:0.580983029894
0 3:0.811410388153
0 4:0.816697165237
0 5:0.87387512837
0 6:0.697620260194
0 7:0.855126569918
1 2:0.470920630011
1 3:0.819935452192
1 4:0.841227487527
1 5:0.934129006143
1 6:0.753076321019
1 7:1.0
2 3:0.477614118584
2 4:0.501466180757
2 5:0.745536691524
2 6:0.501239718952
2 7:0.900908751686
3 4:0.0530213413308
3 5:0.588629836488
3 6:0.29399676711
3 7:0.742701720492
4 5:0.589638523219
4 6:0.31265898835
4 7:0.750189106802
5 6:0.683014935601
5 7:0.480348411921
6 7:0.647002407803
</hsp>