sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OGE-A1104-A1125
X
>3OGY-A1104-A1125
X
>3OHC-A1104-A1125
X
>3OHD-A1104-A1125
X
>3OHY-A1104-A1125
X
>3OI0-A1104-A1125
X
>3KNH-A1095-A1116
X
</seq>
<hsp>
0 1:0.0302932462299
0 2:0.356180361598
0 3:0.344292108282
0 4:0.597634600763
0 5:0.59730576801
0 6:0.999991977838
1 2:0.366300964251
1 3:0.352553910982
1 4:0.604496527339
1 5:0.603494207343
1 6:0.992506880071
2 3:0.034592512783
2 4:0.400043234223
2 5:0.397493081827
2 6:0.924537859662
3 4:0.38631493454
3 5:0.382898754414
3 6:0.917081007078
4 5:0.0234807657487
4 6:0.881285668027
5 6:0.878077007214
</hsp>